Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.4■□□□□ 0.22
XCR1P46094 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.4■□□□□ 0.22
XCR1P46094 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
XCR1P46094 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
XCR1P46094 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
XCR1P46094 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
XCR1P46094 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
XCR1P46094 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.39■□□□□ 0.21
XCR1P46094 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.39■□□□□ 0.21
XCR1P46094 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.39■□□□□ 0.21
XCR1P46094 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.39■□□□□ 0.21
XCR1P46094 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.39■□□□□ 0.21
XCR1P46094 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.39■□□□□ 0.21
XCR1P46094 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.39■□□□□ 0.21
XCR1P46094 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
XCR1P46094 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.39■□□□□ 0.21
XCR1P46094 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
XCR1P46094 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XCR1P46094 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.38■□□□□ 0.21
XCR1P46094 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.38■□□□□ 0.21
XCR1P46094 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.38■□□□□ 0.21
XCR1P46094 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.38■□□□□ 0.21
XCR1P46094 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
XCR1P46094 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.38■□□□□ 0.21
XCR1P46094 AL590627.1-203ENST00000421194 1026 ntBASIC16.38■□□□□ 0.21
XCR1P46094 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.38■□□□□ 0.21
XCR1P46094 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.38■□□□□ 0.21
XCR1P46094 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.38■□□□□ 0.21
XCR1P46094 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.38■□□□□ 0.21
XCR1P46094 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.38■□□□□ 0.21
XCR1P46094 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.38■□□□□ 0.21
XCR1P46094 AC012640.2-201ENST00000561606 901 ntBASIC16.38■□□□□ 0.21
XCR1P46094 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.38■□□□□ 0.21
XCR1P46094 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
XCR1P46094 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
XCR1P46094 AC006557.2-201ENST00000592985 1240 ntBASIC16.38■□□□□ 0.21
XCR1P46094 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
XCR1P46094 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.38■□□□□ 0.21
XCR1P46094 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
XCR1P46094 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.38■□□□□ 0.21
XCR1P46094 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
XCR1P46094 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.38■□□□□ 0.21
XCR1P46094 AC243591.1-201ENST00000452967 1364 ntBASIC16.38■□□□□ 0.21
XCR1P46094 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.37■□□□□ 0.21
XCR1P46094 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
XCR1P46094 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
XCR1P46094 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.37■□□□□ 0.21
XCR1P46094 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
XCR1P46094 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.37■□□□□ 0.21
XCR1P46094 AC092910.1-201ENST00000482027 1129 ntBASIC16.37■□□□□ 0.21
XCR1P46094 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.37■□□□□ 0.21
XCR1P46094 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.37■□□□□ 0.21
XCR1P46094 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.37■□□□□ 0.21
XCR1P46094 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 AC105339.3-201ENST00000560043 636 ntBASIC16.37■□□□□ 0.21
XCR1P46094 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.37■□□□□ 0.21
XCR1P46094 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.37■□□□□ 0.21
XCR1P46094 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.37■□□□□ 0.21
XCR1P46094 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.37■□□□□ 0.21
XCR1P46094 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.37■□□□□ 0.21
XCR1P46094 AC120114.3-201ENST00000611923 658 ntBASIC16.37■□□□□ 0.21
XCR1P46094 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.37■□□□□ 0.21
XCR1P46094 AC116407.3-201ENST00000623905 1129 ntBASIC16.37■□□□□ 0.21
XCR1P46094 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
XCR1P46094 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.37■□□□□ 0.21
XCR1P46094 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XCR1P46094 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms