Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A2P43354 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A2P43354 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
NR4A2P43354 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
NR4A2P43354 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A2P43354 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A2P43354 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.67■□□□□ 0.1
NR4A2P43354 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A2P43354 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A2P43354 AL109659.2-201ENST00000606809 1674 ntBASIC15.67■□□□□ 0.1
NR4A2P43354 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A2P43354 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.66■□□□□ 0.1
NR4A2P43354 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.66■□□□□ 0.1
NR4A2P43354 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.66■□□□□ 0.1
NR4A2P43354 LYSMD4-203ENST00000378904 2122 ntBASIC15.66■□□□□ 0.1
NR4A2P43354 TPM4P1-201ENST00000436100 807 ntBASIC15.66■□□□□ 0.1
NR4A2P43354 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
NR4A2P43354 BX276092.5-203ENST00000456199 560 ntBASIC15.66■□□□□ 0.1
NR4A2P43354 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.66■□□□□ 0.1
NR4A2P43354 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.66■□□□□ 0.1
NR4A2P43354 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.66■□□□□ 0.1
NR4A2P43354 AL121672.3-201ENST00000608644 468 ntBASIC15.66■□□□□ 0.1
NR4A2P43354 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.66■□□□□ 0.1
NR4A2P43354 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.66■□□□□ 0.1
NR4A2P43354 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A2P43354 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A2P43354 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A2P43354 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NR4A2P43354 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR4A2P43354 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NR4A2P43354 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A2P43354 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A2P43354 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A2P43354 TSSC2-201ENST00000450217 709 ntBASIC15.65■□□□□ 0.1
NR4A2P43354 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.65■□□□□ 0.1
NR4A2P43354 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A2P43354 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.65■□□□□ 0.1
NR4A2P43354 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.65■□□□□ 0.1
NR4A2P43354 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.65■□□□□ 0.1
NR4A2P43354 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A2P43354 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.65■□□□□ 0.1
NR4A2P43354 AC092329.2-201ENST00000598402 547 ntBASIC15.65■□□□□ 0.1
NR4A2P43354 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NR4A2P43354 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.65■□□□□ 0.1
NR4A2P43354 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 TCAF2P1-201ENST00000291129 2421 ntBASIC15.65■□□□□ 0.1
NR4A2P43354 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A2P43354 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.64■□□□□ 0.1
NR4A2P43354 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.64■□□□□ 0.09
NR4A2P43354 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A2P43354 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A2P43354 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A2P43354 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A2P43354 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms