Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.18□□□□□ -0.14
SNCAP37840 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 LYSMD4-203ENST00000378904 2122 ntBASIC14.18□□□□□ -0.14
SNCAP37840 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.18□□□□□ -0.14
SNCAP37840 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SNCAP37840 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SNCAP37840 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.18□□□□□ -0.14
SNCAP37840 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.18□□□□□ -0.14
SNCAP37840 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.18□□□□□ -0.14
SNCAP37840 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.18□□□□□ -0.14
SNCAP37840 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SNCAP37840 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SNCAP37840 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.18□□□□□ -0.14
SNCAP37840 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.18□□□□□ -0.14
SNCAP37840 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 MIR600HG-201ENST00000449175 5984 ntBASIC14.18□□□□□ -0.14
SNCAP37840 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.18□□□□□ -0.14
SNCAP37840 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCAP37840 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCAP37840 AC009949.1-201ENST00000623048 1830 ntBASIC14.18□□□□□ -0.14
SNCAP37840 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.17□□□□□ -0.14
SNCAP37840 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SNCAP37840 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.17□□□□□ -0.14
SNCAP37840 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.17□□□□□ -0.14
SNCAP37840 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
SNCAP37840 KRT18P65-201ENST00000439811 1286 ntBASIC14.17□□□□□ -0.14
SNCAP37840 DDX43P3-201ENST00000441064 443 ntBASIC14.17□□□□□ -0.14
SNCAP37840 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.17□□□□□ -0.14
SNCAP37840 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
SNCAP37840 AC024563.2-201ENST00000603282 481 ntBASIC14.17□□□□□ -0.14
SNCAP37840 FAM87A-204ENST00000613235 858 ntBASIC14.17□□□□□ -0.14
SNCAP37840 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
SNCAP37840 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SNCAP37840 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.17□□□□□ -0.14
SNCAP37840 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SNCAP37840 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCAP37840 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SNCAP37840 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms