Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PCK1P35558 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCK1P35558 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCK1P35558 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.11■□□□□ 0.49
PCK1P35558 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.11■□□□□ 0.49
PCK1P35558 KRT16P4-201ENST00000453883 522 ntBASIC18.11■□□□□ 0.49
PCK1P35558 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.11■□□□□ 0.49
PCK1P35558 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.11■□□□□ 0.49
PCK1P35558 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCK1P35558 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.11■□□□□ 0.49
PCK1P35558 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.11■□□□□ 0.49
PCK1P35558 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCK1P35558 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCK1P35558 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.11■□□□□ 0.49
PCK1P35558 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCK1P35558 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCK1P35558 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.11■□□□□ 0.49
PCK1P35558 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCK1P35558 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCK1P35558 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCK1P35558 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCK1P35558 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCK1P35558 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.1■□□□□ 0.49
PCK1P35558 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.1■□□□□ 0.49
PCK1P35558 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCK1P35558 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.1■□□□□ 0.49
PCK1P35558 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.1■□□□□ 0.49
PCK1P35558 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
PCK1P35558 ABCD1P5-201ENST00000445663 754 ntBASIC18.1■□□□□ 0.49
PCK1P35558 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.1■□□□□ 0.49
PCK1P35558 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCK1P35558 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 AL391005.1-201ENST00000623953 2435 ntBASIC18.1■□□□□ 0.49
PCK1P35558 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.1■□□□□ 0.49
PCK1P35558 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCK1P35558 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCK1P35558 SIGLEC16-201ENST00000599858 1437 ntBASIC18.09■□□□□ 0.49
PCK1P35558 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PCK1P35558 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 SPDYE21P-201ENST00000413323 827 ntBASIC18.09■□□□□ 0.49
PCK1P35558 NUS1P2-201ENST00000417358 873 ntBASIC18.09■□□□□ 0.49
PCK1P35558 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.09■□□□□ 0.49
PCK1P35558 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 AC073592.4-201ENST00000623827 446 ntBASIC18.09■□□□□ 0.49
PCK1P35558 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCK1P35558 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.09■□□□□ 0.49
PCK1P35558 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms