Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1BP28222 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.13■□□□□ 0.33
HTR1BP28222 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1BP28222 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1BP28222 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.13■□□□□ 0.33
HTR1BP28222 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.13■□□□□ 0.33
HTR1BP28222 MIR4751-201ENST00000578027 74 ntBASIC17.13■□□□□ 0.33
HTR1BP28222 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1BP28222 AL353135.1-201ENST00000606729 504 ntBASIC17.13■□□□□ 0.33
HTR1BP28222 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1BP28222 AL805961.1-202ENST00000641562 540 ntBASIC17.13■□□□□ 0.33
HTR1BP28222 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1BP28222 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1BP28222 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1BP28222 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1BP28222 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
HTR1BP28222 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1BP28222 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1BP28222 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1BP28222 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1BP28222 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1BP28222 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1BP28222 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1BP28222 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1BP28222 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1BP28222 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
HTR1BP28222 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.12■□□□□ 0.33
HTR1BP28222 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1BP28222 PGAM5P1-201ENST00000518923 814 ntBASIC17.12■□□□□ 0.33
HTR1BP28222 IGHV3-65-201ENST00000523210 341 ntBASIC17.12■□□□□ 0.33
HTR1BP28222 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1BP28222 AC064836.3-201ENST00000607928 673 ntBASIC17.12■□□□□ 0.33
HTR1BP28222 AL139327.4-201ENST00000612362 153 ntBASIC17.12■□□□□ 0.33
HTR1BP28222 GGTLC5P-201ENST00000617623 998 ntBASIC17.12■□□□□ 0.33
HTR1BP28222 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
HTR1BP28222 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1BP28222 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1BP28222 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1BP28222 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1BP28222 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HTR1BP28222 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HTR1BP28222 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HTR1BP28222 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HTR1BP28222 AP002414.1-201ENST00000391405 1147 ntBASIC17.11■□□□□ 0.33
HTR1BP28222 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1BP28222 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1BP28222 MIR1233-2-201ENST00000408138 82 ntBASIC17.11■□□□□ 0.33
HTR1BP28222 MIR1233-1-201ENST00000408722 82 ntBASIC17.11■□□□□ 0.33
HTR1BP28222 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1BP28222 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1BP28222 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1BP28222 AC108073.2-201ENST00000464002 357 ntBASIC17.11■□□□□ 0.33
HTR1BP28222 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1BP28222 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1BP28222 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1BP28222 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HTR1BP28222 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
HTR1BP28222 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HTR1BP28222 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1BP28222 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1BP28222 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1BP28222 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1BP28222 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1BP28222 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1BP28222 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1BP28222 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1BP28222 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1BP28222 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR1BP28222 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1BP28222 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1BP28222 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1BP28222 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms