Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMAP28067 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMAP28067 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DMAP28067 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMAP28067 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMAP28067 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DMAP28067 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DMAP28067 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DMAP28067 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMAP28067 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 MTHFR-217ENST00000641820 1569 ntBASIC14.9□□□□□ -0.02
HLA-DMAP28067 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.9□□□□□ -0.02
HLA-DMAP28067 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DMAP28067 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DMAP28067 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 KRT18P29-201ENST00000397031 1267 ntBASIC14.89□□□□□ -0.03
HLA-DMAP28067 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 KRT18P6-201ENST00000555540 1265 ntBASIC14.89□□□□□ -0.03
HLA-DMAP28067 AL353719.1-201ENST00000566847 864 ntBASIC14.89□□□□□ -0.03
HLA-DMAP28067 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 AL023803.3-201ENST00000615559 522 ntBASIC14.89□□□□□ -0.03
HLA-DMAP28067 FAM197Y4-202ENST00000622692 608 ntBASIC14.89□□□□□ -0.03
HLA-DMAP28067 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 TNRC18P2-201ENST00000417666 2714 ntBASIC14.89□□□□□ -0.03
HLA-DMAP28067 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DMAP28067 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DMAP28067 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms