Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
PTPN3P26045 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 NCF1C-201ENST00000438382 1427 ntBASIC17.5■□□□□ 0.39
PTPN3P26045 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN3P26045 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PTPN3P26045 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPN3P26045 LINC01711-201ENST00000598340 967 ntBASIC17.5■□□□□ 0.39
PTPN3P26045 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PTPN3P26045 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTPN3P26045 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN3P26045 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTPN3P26045 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
PTPN3P26045 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN3P26045 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PTPN3P26045 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.49■□□□□ 0.39
PTPN3P26045 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN3P26045 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.49■□□□□ 0.39
PTPN3P26045 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN3P26045 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN3P26045 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN3P26045 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN3P26045 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN3P26045 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PTPN3P26045 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PTPN3P26045 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTPN3P26045 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTPN3P26045 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN3P26045 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PTPN3P26045 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 AC099398.1-201ENST00000567919 2776 ntBASIC17.48■□□□□ 0.39
PTPN3P26045 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
PTPN3P26045 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PTPN3P26045 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PTPN3P26045 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PTPN3P26045 MTDHP4-201ENST00000600287 670 ntBASIC17.48■□□□□ 0.39
PTPN3P26045 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN3P26045 AL589182.2-201ENST00000619332 1049 ntBASIC17.48■□□□□ 0.39
PTPN3P26045 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN3P26045 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN3P26045 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PTPN3P26045 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN3P26045 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN3P26045 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN3P26045 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTPN3P26045 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 AP002414.1-201ENST00000391405 1147 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms