Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 AC122714.2-201ENST00000502787 707 ntBASIC15.98■□□□□ 0.15
TNFRSF1BP20333 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 AC124947.2-201ENST00000547118 1133 ntBASIC15.98■□□□□ 0.15
TNFRSF1BP20333 AC111152.3-201ENST00000569699 673 ntBASIC15.98■□□□□ 0.15
TNFRSF1BP20333 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 AC092364.2-201ENST00000596710 2692 ntBASIC15.98■□□□□ 0.15
TNFRSF1BP20333 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TNFRSF1BP20333 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 AC022616.7-201ENST00000525383 220 ntBASIC15.97■□□□□ 0.15
TNFRSF1BP20333 AL353801.3-201ENST00000609898 542 ntBASIC15.97■□□□□ 0.15
TNFRSF1BP20333 IGHV3-41-201ENST00000613121 348 ntBASIC15.97■□□□□ 0.15
TNFRSF1BP20333 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 AC006449.5-201ENST00000610658 2098 ntBASIC15.97■□□□□ 0.15
TNFRSF1BP20333 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 PCDHB17P-201ENST00000539533 2393 ntBASIC15.97■□□□□ 0.15
TNFRSF1BP20333 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.97■□□□□ 0.15
TNFRSF1BP20333 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 FRMD8P1-201ENST00000440433 1524 ntBASIC15.96■□□□□ 0.15
TNFRSF1BP20333 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 FAM220CP-201ENST00000395253 831 ntBASIC15.96■□□□□ 0.15
TNFRSF1BP20333 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TNFRSF1BP20333 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms