Protein–RNA interactions for Protein: P19429

TNNI3, Troponin I, cardiac muscle, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3P19429 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.4■□□□□ 0.22
TNNI3P19429 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNNI3P19429 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TNNI3P19429 AC008894.3-201ENST00000624324 3103 ntBASIC16.4■□□□□ 0.22
TNNI3P19429 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNNI3P19429 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNNI3P19429 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNNI3P19429 AC005104.2-201ENST00000427818 678 ntBASIC16.4■□□□□ 0.22
TNNI3P19429 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.4■□□□□ 0.22
TNNI3P19429 SAPCD2P3-201ENST00000455031 850 ntBASIC16.4■□□□□ 0.22
TNNI3P19429 STK19B-204ENST00000512515 211 ntBASIC16.4■□□□□ 0.22
TNNI3P19429 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.4■□□□□ 0.22
TNNI3P19429 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.4■□□□□ 0.22
TNNI3P19429 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TNNI3P19429 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.4■□□□□ 0.22
TNNI3P19429 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.4■□□□□ 0.22
TNNI3P19429 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 REXO1L6P-202ENST00000619970 1078 ntBASIC16.4■□□□□ 0.22
TNNI3P19429 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNNI3P19429 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.4■□□□□ 0.22
TNNI3P19429 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.4■□□□□ 0.22
TNNI3P19429 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNNI3P19429 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.4■□□□□ 0.22
TNNI3P19429 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.4■□□□□ 0.22
TNNI3P19429 LINC00304-203ENST00000565008 1864 ntBASIC16.39■□□□□ 0.22
TNNI3P19429 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TNNI3P19429 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
TNNI3P19429 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TNNI3P19429 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TNNI3P19429 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 FLJ16779-201ENST00000612722 7638 ntBASIC16.39■□□□□ 0.21
TNNI3P19429 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TNNI3P19429 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.39■□□□□ 0.21
TNNI3P19429 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.39■□□□□ 0.21
TNNI3P19429 KLF4P1-201ENST00000412782 1185 ntBASIC16.39■□□□□ 0.21
TNNI3P19429 RBM17P3-201ENST00000417687 1192 ntBASIC16.39■□□□□ 0.21
TNNI3P19429 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.39■□□□□ 0.21
TNNI3P19429 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.39■□□□□ 0.21
TNNI3P19429 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.39■□□□□ 0.21
TNNI3P19429 AP000867.4-201ENST00000641616 219 ntBASIC16.39■□□□□ 0.21
TNNI3P19429 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.39■□□□□ 0.21
TNNI3P19429 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.39■□□□□ 0.21
TNNI3P19429 AL353593.2-201ENST00000602529 1483 ntBASIC16.39■□□□□ 0.21
TNNI3P19429 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.39■□□□□ 0.21
TNNI3P19429 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNNI3P19429 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.38■□□□□ 0.21
TNNI3P19429 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.38■□□□□ 0.21
TNNI3P19429 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.38■□□□□ 0.21
TNNI3P19429 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.38■□□□□ 0.21
TNNI3P19429 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TNNI3P19429 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TNNI3P19429 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TNNI3P19429 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TNNI3P19429 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 AKR1C7P-201ENST00000305623 895 ntBASIC16.38■□□□□ 0.21
TNNI3P19429 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 AC003669.1-201ENST00000334569 611 ntBASIC16.38■□□□□ 0.21
TNNI3P19429 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TNNI3P19429 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNNI3P19429 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.38■□□□□ 0.21
TNNI3P19429 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.38■□□□□ 0.21
TNNI3P19429 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TNNI3P19429 SCARNA2-201ENST00000458748 420 ntBASIC16.38■□□□□ 0.21
TNNI3P19429 AC106795.1-205ENST00000512851 1056 ntBASIC16.38■□□□□ 0.21
TNNI3P19429 AF238378.1-201ENST00000526806 358 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms