Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.44□□□□□ -0.26
CD28P10747 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.43□□□□□ -0.26
CD28P10747 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 AL590787.1-201ENST00000568856 1315 ntBASIC13.43□□□□□ -0.26
CD28P10747 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.43□□□□□ -0.26
CD28P10747 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 REXO1L11P-201ENST00000620964 1927 ntBASIC13.43□□□□□ -0.26
CD28P10747 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD28P10747 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CD28P10747 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.43□□□□□ -0.26
CD28P10747 PDPK2P-202ENST00000562415 1191 ntBASIC13.43□□□□□ -0.26
CD28P10747 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CD28P10747 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
CD28P10747 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.43□□□□□ -0.26
CD28P10747 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.43□□□□□ -0.26
CD28P10747 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.43□□□□□ -0.26
CD28P10747 AC025580.3-201ENST00000617932 1424 ntBASIC13.43□□□□□ -0.26
CD28P10747 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD28P10747 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 AL135999.2-201ENST00000622438 1686 ntBASIC13.43□□□□□ -0.26
CD28P10747 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CD28P10747 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD28P10747 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 KRT18P28-201ENST00000453838 1332 ntBASIC13.42□□□□□ -0.26
CD28P10747 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.42□□□□□ -0.26
CD28P10747 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CD28P10747 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.42□□□□□ -0.26
CD28P10747 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
CD28P10747 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.42□□□□□ -0.26
CD28P10747 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
CD28P10747 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 METTL21AP1-201ENST00000438852 635 ntBASIC13.42□□□□□ -0.26
CD28P10747 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.42□□□□□ -0.26
CD28P10747 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.42□□□□□ -0.26
CD28P10747 AL355385.1-201ENST00000606123 409 ntBASIC13.42□□□□□ -0.26
CD28P10747 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.42□□□□□ -0.26
CD28P10747 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.42□□□□□ -0.26
CD28P10747 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD28P10747 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CD28P10747 BICD1-207ENST00000551848 1962 ntBASIC13.41□□□□□ -0.26
CD28P10747 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CD28P10747 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
CD28P10747 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.41□□□□□ -0.26
CD28P10747 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.41□□□□□ -0.26
CD28P10747 ABALON-201ENST00000629058 1903 ntBASIC13.41□□□□□ -0.26
CD28P10747 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms