Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
FREM3P0C091 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 AC099398.1-201ENST00000567919 2776 ntBASIC15.57■□□□□ 0.08
FREM3P0C091 MIR940-201ENST00000401276 94 ntBASIC15.57■□□□□ 0.08
FREM3P0C091 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.57■□□□□ 0.08
FREM3P0C091 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
FREM3P0C091 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
FREM3P0C091 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
FREM3P0C091 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FREM3P0C091 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.56■□□□□ 0.08
FREM3P0C091 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.56■□□□□ 0.08
FREM3P0C091 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.56■□□□□ 0.08
FREM3P0C091 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.56■□□□□ 0.08
FREM3P0C091 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.56■□□□□ 0.08
FREM3P0C091 AL353135.1-201ENST00000606729 504 ntBASIC15.56■□□□□ 0.08
FREM3P0C091 AC139530.3-201ENST00000620344 690 ntBASIC15.56■□□□□ 0.08
FREM3P0C091 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FREM3P0C091 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
FREM3P0C091 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.56■□□□□ 0.08
FREM3P0C091 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
FREM3P0C091 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FREM3P0C091 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
FREM3P0C091 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FREM3P0C091 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.56■□□□□ 0.08
FREM3P0C091 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.56■□□□□ 0.08
FREM3P0C091 ALG1L5P-201ENST00000482043 771 ntBASIC15.56■□□□□ 0.08
FREM3P0C091 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
FREM3P0C091 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.56■□□□□ 0.08
FREM3P0C091 AC004706.3-202ENST00000621574 984 ntBASIC15.56■□□□□ 0.08
FREM3P0C091 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.56■□□□□ 0.08
FREM3P0C091 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FREM3P0C091 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.55■□□□□ 0.08
FREM3P0C091 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.55■□□□□ 0.08
FREM3P0C091 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
FREM3P0C091 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
FREM3P0C091 RPSAP43-201ENST00000402237 625 ntBASIC15.55■□□□□ 0.08
FREM3P0C091 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
FREM3P0C091 AL139327.4-201ENST00000612362 153 ntBASIC15.55■□□□□ 0.08
FREM3P0C091 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.55■□□□□ 0.08
FREM3P0C091 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
FREM3P0C091 PRORSD1P-202ENST00000563365 2154 ntBASIC15.55■□□□□ 0.08
FREM3P0C091 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.55■□□□□ 0.08
FREM3P0C091 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
FREM3P0C091 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.55■□□□□ 0.08
FREM3P0C091 AC002347.1-201ENST00000569543 541 ntBASIC15.55■□□□□ 0.08
FREM3P0C091 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FREM3P0C091 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FREM3P0C091 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FREM3P0C091 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FREM3P0C091 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FREM3P0C091 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FREM3P0C091 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
FREM3P0C091 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FREM3P0C091 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
FREM3P0C091 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FREM3P0C091 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FREM3P0C091 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms