Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
THBS1P07996 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.81■□□□□ 0.12
THBS1P07996 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
THBS1P07996 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
THBS1P07996 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.81■□□□□ 0.12
THBS1P07996 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
THBS1P07996 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
THBS1P07996 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.81■□□□□ 0.12
THBS1P07996 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.81■□□□□ 0.12
THBS1P07996 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.81■□□□□ 0.12
THBS1P07996 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.81■□□□□ 0.12
THBS1P07996 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.81■□□□□ 0.12
THBS1P07996 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THBS1P07996 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.81■□□□□ 0.12
THBS1P07996 AC097637.2-201ENST00000624096 1997 ntBASIC15.81■□□□□ 0.12
THBS1P07996 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THBS1P07996 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
THBS1P07996 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
THBS1P07996 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
THBS1P07996 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THBS1P07996 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
THBS1P07996 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS1P07996 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS1P07996 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 AP005117.1-201ENST00000584346 1413 ntBASIC15.8■□□□□ 0.12
THBS1P07996 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
THBS1P07996 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
THBS1P07996 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.8■□□□□ 0.12
THBS1P07996 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS1P07996 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 PRYP5-201ENST00000451909 266 ntBASIC15.8■□□□□ 0.12
THBS1P07996 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.8■□□□□ 0.12
THBS1P07996 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
THBS1P07996 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS1P07996 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.8■□□□□ 0.12
THBS1P07996 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.8■□□□□ 0.12
THBS1P07996 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.8■□□□□ 0.12
THBS1P07996 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.8■□□□□ 0.12
THBS1P07996 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 AC004817.3-201ENST00000602957 2129 ntBASIC15.8■□□□□ 0.12
THBS1P07996 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS1P07996 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.8■□□□□ 0.12
THBS1P07996 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS1P07996 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.8■□□□□ 0.12
THBS1P07996 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
THBS1P07996 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS1P07996 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS1P07996 AC078925.2-201ENST00000624013 1973 ntBASIC15.79■□□□□ 0.12
THBS1P07996 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS1P07996 LINC00982-205ENST00000420957 435 ntBASIC15.79■□□□□ 0.12
THBS1P07996 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
THBS1P07996 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.79■□□□□ 0.12
THBS1P07996 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS1P07996 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS1P07996 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.79■□□□□ 0.12
THBS1P07996 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS1P07996 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS1P07996 AC138894.3-201ENST00000603787 634 ntBASIC15.79■□□□□ 0.12
THBS1P07996 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS1P07996 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS1P07996 AL118508.1-201ENST00000613502 2345 ntBASIC15.79■□□□□ 0.12
THBS1P07996 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS1P07996 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
THBS1P07996 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS1P07996 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms