Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 MRPL20P1-201ENST00000400819 433 ntBASIC20.55■□□□□ 0.88
CHGBP05060 AC023274.1-201ENST00000418278 595 ntBASIC20.55■□□□□ 0.88
CHGBP05060 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.55■□□□□ 0.88
CHGBP05060 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGBP05060 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.55■□□□□ 0.88
CHGBP05060 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.55■□□□□ 0.88
CHGBP05060 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGBP05060 KRT18P58-201ENST00000527480 1120 ntBASIC20.55■□□□□ 0.88
CHGBP05060 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.55■□□□□ 0.88
CHGBP05060 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.55■□□□□ 0.88
CHGBP05060 AC027601.4-201ENST00000611259 610 ntBASIC20.55■□□□□ 0.88
CHGBP05060 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGBP05060 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGBP05060 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHGBP05060 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CHGBP05060 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CHGBP05060 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGBP05060 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CHGBP05060 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.54■□□□□ 0.88
CHGBP05060 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CHGBP05060 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHGBP05060 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHGBP05060 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CHGBP05060 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.54■□□□□ 0.88
CHGBP05060 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHGBP05060 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.54■□□□□ 0.88
CHGBP05060 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.54■□□□□ 0.88
CHGBP05060 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.54■□□□□ 0.88
CHGBP05060 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.54■□□□□ 0.88
CHGBP05060 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.54■□□□□ 0.88
CHGBP05060 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGBP05060 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHGBP05060 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHGBP05060 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.53■□□□□ 0.88
CHGBP05060 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.53■□□□□ 0.88
CHGBP05060 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
CHGBP05060 CRYGEP-201ENST00000412192 528 ntBASIC20.53■□□□□ 0.88
CHGBP05060 PMS2P1-201ENST00000431037 1228 ntBASIC20.53■□□□□ 0.88
CHGBP05060 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.53■□□□□ 0.88
CHGBP05060 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.53■□□□□ 0.88
CHGBP05060 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHGBP05060 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.53■□□□□ 0.88
CHGBP05060 AC010654.1-201ENST00000615722 808 ntBASIC20.53■□□□□ 0.88
CHGBP05060 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHGBP05060 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGBP05060 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.52■□□□□ 0.88
CHGBP05060 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHGBP05060 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.52■□□□□ 0.88
CHGBP05060 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
CHGBP05060 PRSS29P-201ENST00000440800 595 ntBASIC20.52■□□□□ 0.88
CHGBP05060 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.52■□□□□ 0.88
CHGBP05060 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHGBP05060 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.52■□□□□ 0.88
CHGBP05060 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.52■□□□□ 0.88
CHGBP05060 FAM197Y3-203ENST00000618346 717 ntBASIC20.52■□□□□ 0.88
CHGBP05060 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms