Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 AC111152.3-201ENST00000569699 673 ntBASIC17.53■□□□□ 0.4
MT-ND3P03897 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.53■□□□□ 0.4
MT-ND3P03897 AP002414.4-201ENST00000589764 1148 ntBASIC17.53■□□□□ 0.4
MT-ND3P03897 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.53■□□□□ 0.4
MT-ND3P03897 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND3P03897 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND3P03897 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
MT-ND3P03897 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-ND3P03897 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
MT-ND3P03897 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-ND3P03897 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND3P03897 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
MT-ND3P03897 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
MT-ND3P03897 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MT-ND3P03897 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MT-ND3P03897 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MT-ND3P03897 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-ND3P03897 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
MT-ND3P03897 AC026396.1-201ENST00000419388 421 ntBASIC17.52■□□□□ 0.4
MT-ND3P03897 NUS1P1-201ENST00000446295 882 ntBASIC17.52■□□□□ 0.4
MT-ND3P03897 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.52■□□□□ 0.4
MT-ND3P03897 MIR3180-1-201ENST00000580374 94 ntBASIC17.52■□□□□ 0.4
MT-ND3P03897 AC090616.6-201ENST00000582640 721 ntBASIC17.52■□□□□ 0.4
MT-ND3P03897 MIR3180-3-201ENST00000584616 94 ntBASIC17.52■□□□□ 0.4
MT-ND3P03897 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.52■□□□□ 0.4
MT-ND3P03897 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.52■□□□□ 0.4
MT-ND3P03897 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.52■□□□□ 0.4
MT-ND3P03897 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-ND3P03897 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
MT-ND3P03897 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-ND3P03897 AC092053.1-201ENST00000605787 1936 ntBASIC17.52■□□□□ 0.4
MT-ND3P03897 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND3P03897 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.52■□□□□ 0.4
MT-ND3P03897 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.52■□□□□ 0.4
MT-ND3P03897 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.52■□□□□ 0.39
MT-ND3P03897 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.52■□□□□ 0.39
MT-ND3P03897 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
MT-ND3P03897 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.52■□□□□ 0.39
MT-ND3P03897 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.52■□□□□ 0.39
MT-ND3P03897 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-ND3P03897 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
MT-ND3P03897 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.52■□□□□ 0.39
MT-ND3P03897 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.52■□□□□ 0.39
MT-ND3P03897 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-ND3P03897 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
MT-ND3P03897 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-ND3P03897 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-ND3P03897 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
MT-ND3P03897 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MT-ND3P03897 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-ND3P03897 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND3P03897 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND3P03897 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MT-ND3P03897 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-ND3P03897 AP003733.1-201ENST00000491725 852 ntBASIC17.51■□□□□ 0.39
MT-ND3P03897 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.51■□□□□ 0.39
MT-ND3P03897 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.51■□□□□ 0.39
MT-ND3P03897 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.51■□□□□ 0.39
MT-ND3P03897 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-ND3P03897 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND3P03897 AC012313.10-201ENST00000623509 926 ntBASIC17.51■□□□□ 0.39
MT-ND3P03897 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms