Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBC1P01850 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRBC1P01850 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRBC1P01850 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBC1P01850 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBC1P01850 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBC1P01850 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBC1P01850 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBC1P01850 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRBC1P01850 GGTLC5P-201ENST00000617623 998 ntBASIC17.18■□□□□ 0.34
TRBC1P01850 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBC1P01850 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRBC1P01850 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBC1P01850 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRBC1P01850 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBC1P01850 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRBC1P01850 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRBC1P01850 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
TRBC1P01850 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBC1P01850 FRMD8P1-201ENST00000440433 1524 ntBASIC17.17■□□□□ 0.34
TRBC1P01850 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRBC1P01850 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRBC1P01850 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBC1P01850 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBC1P01850 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.17■□□□□ 0.34
TRBC1P01850 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 AC009947.1-201ENST00000444350 727 ntBASIC17.17■□□□□ 0.34
TRBC1P01850 AC108073.2-201ENST00000464002 357 ntBASIC17.17■□□□□ 0.34
TRBC1P01850 AC124947.2-201ENST00000547118 1133 ntBASIC17.17■□□□□ 0.34
TRBC1P01850 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBC1P01850 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.17■□□□□ 0.34
TRBC1P01850 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.17■□□□□ 0.34
TRBC1P01850 AC145285.3-201ENST00000564603 959 ntBASIC17.17■□□□□ 0.34
TRBC1P01850 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
TRBC1P01850 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBC1P01850 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBC1P01850 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBC1P01850 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBC1P01850 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBC1P01850 AP001094.4-201ENST00000579008 2176 ntBASIC17.16■□□□□ 0.34
TRBC1P01850 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRBC1P01850 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBC1P01850 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBC1P01850 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBC1P01850 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRBC1P01850 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBC1P01850 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBC1P01850 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBC1P01850 AC092053.1-201ENST00000605787 1936 ntBASIC17.16■□□□□ 0.34
TRBC1P01850 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBC1P01850 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBC1P01850 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRBC1P01850 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBC1P01850 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBC1P01850 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBC1P01850 RPL13AP23-201ENST00000480739 586 ntBASIC17.16■□□□□ 0.34
TRBC1P01850 AC108751.1-201ENST00000490852 363 ntBASIC17.16■□□□□ 0.34
TRBC1P01850 SLC25A1P1-201ENST00000528351 927 ntBASIC17.16■□□□□ 0.34
TRBC1P01850 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.16■□□□□ 0.34
TRBC1P01850 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.16■□□□□ 0.34
TRBC1P01850 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRBC1P01850 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBC1P01850 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms