Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LTAP01374 PAUPAR-201ENST00000630360 2965 ntBASIC12.95□□□□□ -0.34
LTAP01374 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
LTAP01374 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
LTAP01374 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.95□□□□□ -0.34
LTAP01374 HMGA1P5-201ENST00000412453 271 ntBASIC12.95□□□□□ -0.34
LTAP01374 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.95□□□□□ -0.34
LTAP01374 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.95□□□□□ -0.34
LTAP01374 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.95□□□□□ -0.34
LTAP01374 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
LTAP01374 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.95□□□□□ -0.34
LTAP01374 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.95□□□□□ -0.34
LTAP01374 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.95□□□□□ -0.34
LTAP01374 AC109462.3-201ENST00000573934 613 ntBASIC12.95□□□□□ -0.34
LTAP01374 MIR4785-201ENST00000585005 73 ntBASIC12.95□□□□□ -0.34
LTAP01374 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.95□□□□□ -0.34
LTAP01374 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.95□□□□□ -0.34
LTAP01374 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
LTAP01374 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LTAP01374 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.95□□□□□ -0.34
LTAP01374 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LTAP01374 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LTAP01374 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LTAP01374 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LTAP01374 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LTAP01374 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LTAP01374 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LTAP01374 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LTAP01374 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 TUBB8P12-201ENST00000308911 1335 ntBASIC12.94□□□□□ -0.34
LTAP01374 TUBB7P-202ENST00000428444 1305 ntBASIC12.94□□□□□ -0.34
LTAP01374 TUBB8P7-204ENST00000567960 1332 ntBASIC12.94□□□□□ -0.34
LTAP01374 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.94□□□□□ -0.34
LTAP01374 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 ALOX12P2-203ENST00000570921 1945 ntBASIC12.94□□□□□ -0.34
LTAP01374 AL645728.1-201ENST00000366221 2101 ntBASIC12.94□□□□□ -0.34
LTAP01374 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LTAP01374 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 GPR89P-201ENST00000407924 1495 ntBASIC12.94□□□□□ -0.34
LTAP01374 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.94□□□□□ -0.34
LTAP01374 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.94□□□□□ -0.34
LTAP01374 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 FAM201B-201ENST00000458407 597 ntBASIC12.94□□□□□ -0.34
LTAP01374 ECEL1P2-202ENST00000465689 757 ntBASIC12.94□□□□□ -0.34
LTAP01374 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.94□□□□□ -0.34
LTAP01374 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 FAM87A-204ENST00000613235 858 ntBASIC12.94□□□□□ -0.34
LTAP01374 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LTAP01374 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LTAP01374 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LTAP01374 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 AC006538.1-201ENST00000567905 1585 ntBASIC12.94□□□□□ -0.34
LTAP01374 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LTAP01374 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms