Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PDGFBP01127 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PDGFBP01127 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PDGFBP01127 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.07■□□□□ 0.32
PDGFBP01127 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.07■□□□□ 0.32
PDGFBP01127 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.07■□□□□ 0.32
PDGFBP01127 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFBP01127 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.07■□□□□ 0.32
PDGFBP01127 GPR182-203ENST00000622922 591 ntBASIC17.07■□□□□ 0.32
PDGFBP01127 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFBP01127 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFBP01127 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PDGFBP01127 AC135776.1-201ENST00000319817 2481 ntBASIC17.06■□□□□ 0.32
PDGFBP01127 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.06■□□□□ 0.32
PDGFBP01127 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PDGFBP01127 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 MTND6P24-201ENST00000440466 518 ntBASIC17.06■□□□□ 0.32
PDGFBP01127 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.06■□□□□ 0.32
PDGFBP01127 RN7SL837P-201ENST00000463010 287 ntBASIC17.06■□□□□ 0.32
PDGFBP01127 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PDGFBP01127 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.06■□□□□ 0.32
PDGFBP01127 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.06■□□□□ 0.32
PDGFBP01127 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFBP01127 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PDGFBP01127 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PDGFBP01127 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFBP01127 AL353732.1-201ENST00000569618 1459 ntBASIC17.05■□□□□ 0.32
PDGFBP01127 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
PDGFBP01127 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFBP01127 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.05■□□□□ 0.32
PDGFBP01127 SPDYE19P-201ENST00000338590 713 ntBASIC17.05■□□□□ 0.32
PDGFBP01127 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PDGFBP01127 TMEM14DP-201ENST00000422205 345 ntBASIC17.05■□□□□ 0.32
PDGFBP01127 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFBP01127 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PDGFBP01127 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFBP01127 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.05■□□□□ 0.32
PDGFBP01127 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.05■□□□□ 0.32
PDGFBP01127 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 AC007431.3-201ENST00000623221 587 ntBASIC17.05■□□□□ 0.32
PDGFBP01127 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 REXO1L11P-201ENST00000620964 1927 ntBASIC17.05■□□□□ 0.32
PDGFBP01127 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFBP01127 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFBP01127 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFBP01127 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFBP01127 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms