Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 ELK2BP-201ENST00000415014 1224 ntBASIC15.82■□□□□ 0.12
NKX2-2O95096 RPS2P1-201ENST00000434010 821 ntBASIC15.82■□□□□ 0.12
NKX2-2O95096 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 FAAHP1-202ENST00000446499 1238 ntBASIC15.82■□□□□ 0.12
NKX2-2O95096 PAWRP1-201ENST00000451083 565 ntBASIC15.82■□□□□ 0.12
NKX2-2O95096 AC018712.1-201ENST00000455767 687 ntBASIC15.82■□□□□ 0.12
NKX2-2O95096 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.82■□□□□ 0.12
NKX2-2O95096 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.82■□□□□ 0.12
NKX2-2O95096 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.82■□□□□ 0.12
NKX2-2O95096 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 AC006504.4-201ENST00000592118 1568 ntBASIC15.82■□□□□ 0.12
NKX2-2O95096 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 NKILA-202ENST00000614771 2598 ntBASIC15.82■□□□□ 0.12
NKX2-2O95096 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
NKX2-2O95096 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NKX2-2O95096 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX2-2O95096 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 PTCHD3P3-201ENST00000403073 906 ntBASIC15.81■□□□□ 0.12
NKX2-2O95096 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX2-2O95096 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX2-2O95096 KRT18P27-201ENST00000427733 1299 ntBASIC15.81■□□□□ 0.12
NKX2-2O95096 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX2-2O95096 KRT18P67-201ENST00000432816 1264 ntBASIC15.81■□□□□ 0.12
NKX2-2O95096 AC079781.3-201ENST00000449110 356 ntBASIC15.81■□□□□ 0.12
NKX2-2O95096 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.81■□□□□ 0.12
NKX2-2O95096 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NKX2-2O95096 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX2-2O95096 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NKX2-2O95096 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-2O95096 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.81■□□□□ 0.12
NKX2-2O95096 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.81■□□□□ 0.12
NKX2-2O95096 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.81■□□□□ 0.12
NKX2-2O95096 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NKX2-2O95096 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX2-2O95096 AL805961.1-202ENST00000641562 540 ntBASIC15.81■□□□□ 0.12
NKX2-2O95096 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NKX2-2O95096 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX2-2O95096 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NKX2-2O95096 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NKX2-2O95096 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX2-2O95096 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX2-2O95096 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 AL021920.2-201ENST00000624828 1351 ntBASIC15.8■□□□□ 0.12
NKX2-2O95096 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX2-2O95096 AC073621.1-201ENST00000392730 636 ntBASIC15.8■□□□□ 0.12
NKX2-2O95096 AF186996.4-201ENST00000467186 377 ntBASIC15.8■□□□□ 0.12
NKX2-2O95096 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX2-2O95096 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX2-2O95096 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
NKX2-2O95096 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 AF228730.7-201ENST00000641842 219 ntBASIC15.8■□□□□ 0.12
NKX2-2O95096 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NKX2-2O95096 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms