Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFS3O75489 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NDUFS3O75489 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFS3O75489 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFS3O75489 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFS3O75489 ACTG1P4-201ENST00000425123 1122 ntBASIC17.13■□□□□ 0.33
NDUFS3O75489 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.13■□□□□ 0.33
NDUFS3O75489 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 MTDHP3-201ENST00000594186 672 ntBASIC17.13■□□□□ 0.33
NDUFS3O75489 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
NDUFS3O75489 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS3O75489 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 AC004817.3-201ENST00000602957 2129 ntBASIC17.12■□□□□ 0.33
NDUFS3O75489 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFS3O75489 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFS3O75489 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFS3O75489 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NDUFS3O75489 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NDUFS3O75489 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.12■□□□□ 0.33
NDUFS3O75489 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.12■□□□□ 0.33
NDUFS3O75489 BX005266.1-201ENST00000473402 457 ntBASIC17.12■□□□□ 0.33
NDUFS3O75489 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.12■□□□□ 0.33
NDUFS3O75489 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFS3O75489 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 AC009053.2-201ENST00000563701 2365 ntBASIC17.12■□□□□ 0.33
NDUFS3O75489 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFS3O75489 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NDUFS3O75489 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NDUFS3O75489 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NDUFS3O75489 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS3O75489 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NDUFS3O75489 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFS3O75489 AC124947.2-201ENST00000547118 1133 ntBASIC17.11■□□□□ 0.33
NDUFS3O75489 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.11■□□□□ 0.33
NDUFS3O75489 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.11■□□□□ 0.33
NDUFS3O75489 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.11■□□□□ 0.33
NDUFS3O75489 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFS3O75489 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFS3O75489 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms