Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.49■□□□□ 0.23
PRAMEF4O60810 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.49■□□□□ 0.23
PRAMEF4O60810 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 AL589182.2-201ENST00000619332 1049 ntBASIC16.49■□□□□ 0.23
PRAMEF4O60810 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEF4O60810 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 AL645728.1-201ENST00000366221 2101 ntBASIC16.48■□□□□ 0.23
PRAMEF4O60810 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 AC004706.3-202ENST00000621574 984 ntBASIC16.48■□□□□ 0.23
PRAMEF4O60810 AL691432.3-201ENST00000621860 400 ntBASIC16.48■□□□□ 0.23
PRAMEF4O60810 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 AC243591.1-201ENST00000452967 1364 ntBASIC16.48■□□□□ 0.23
PRAMEF4O60810 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 HTR7P1-202ENST00000624664 4411 ntBASIC16.48■□□□□ 0.23
PRAMEF4O60810 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF4O60810 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF4O60810 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms