Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.4■□□□□ 0.06
ZIC3O60481 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
ZIC3O60481 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ZIC3O60481 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 RHOQP3-201ENST00000437982 621 ntBASIC15.4■□□□□ 0.06
ZIC3O60481 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 CXCL1P1-201ENST00000502804 216 ntBASIC15.4■□□□□ 0.06
ZIC3O60481 AC107918.2-201ENST00000530817 355 ntBASIC15.4■□□□□ 0.06
ZIC3O60481 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ZIC3O60481 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZIC3O60481 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZIC3O60481 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.4■□□□□ 0.06
ZIC3O60481 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZIC3O60481 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.39■□□□□ 0.05
ZIC3O60481 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.39■□□□□ 0.05
ZIC3O60481 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ZIC3O60481 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.39■□□□□ 0.05
ZIC3O60481 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.39■□□□□ 0.05
ZIC3O60481 AC124947.2-201ENST00000547118 1133 ntBASIC15.39■□□□□ 0.05
ZIC3O60481 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.39■□□□□ 0.05
ZIC3O60481 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.39■□□□□ 0.05
ZIC3O60481 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.39■□□□□ 0.05
ZIC3O60481 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ZIC3O60481 AC018845.2-201ENST00000568326 409 ntBASIC15.39■□□□□ 0.05
ZIC3O60481 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.39■□□□□ 0.05
ZIC3O60481 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.39■□□□□ 0.05
ZIC3O60481 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.39■□□□□ 0.05
ZIC3O60481 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.39■□□□□ 0.05
ZIC3O60481 ACTL9-202ENST00000612068 1252 ntBASIC15.39■□□□□ 0.05
ZIC3O60481 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ZIC3O60481 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ZIC3O60481 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.39■□□□□ 0.05
ZIC3O60481 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.39■□□□□ 0.05
ZIC3O60481 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZIC3O60481 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
ZIC3O60481 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZIC3O60481 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZIC3O60481 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.38■□□□□ 0.05
ZIC3O60481 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZIC3O60481 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ZIC3O60481 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZIC3O60481 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZIC3O60481 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.38■□□□□ 0.05
ZIC3O60481 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.38■□□□□ 0.05
ZIC3O60481 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.38■□□□□ 0.05
ZIC3O60481 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZIC3O60481 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZIC3O60481 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.38■□□□□ 0.05
ZIC3O60481 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZIC3O60481 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.38■□□□□ 0.05
ZIC3O60481 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.38■□□□□ 0.05
ZIC3O60481 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.38■□□□□ 0.05
ZIC3O60481 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.38■□□□□ 0.05
ZIC3O60481 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.38■□□□□ 0.05
ZIC3O60481 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms