Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA12O60330 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 AC074386.1-202ENST00000463561 864 ntBASIC17.02■□□□□ 0.32
PCDHGA12O60330 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 OR7E47P-204ENST00000575924 449 ntBASIC17.02■□□□□ 0.32
PCDHGA12O60330 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA12O60330 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA12O60330 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA12O60330 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PCDHGA12O60330 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHGA12O60330 AC097637.2-201ENST00000624096 1997 ntBASIC17.02■□□□□ 0.31
PCDHGA12O60330 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
PCDHGA12O60330 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA12O60330 AC009336.1-201ENST00000608941 1553 ntBASIC17.02■□□□□ 0.31
PCDHGA12O60330 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA12O60330 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PCDHGA12O60330 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHGA12O60330 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 AC012317.2-201ENST00000623305 2251 ntBASIC17.01■□□□□ 0.31
PCDHGA12O60330 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 OR6D1P-202ENST00000641007 5290 ntBASIC17.01■□□□□ 0.31
PCDHGA12O60330 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 MIR770-201ENST00000390219 98 ntBASIC17.01■□□□□ 0.31
PCDHGA12O60330 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 FAM8A3P-201ENST00000427218 844 ntBASIC17.01■□□□□ 0.31
PCDHGA12O60330 FAM58CP-201ENST00000435741 640 ntBASIC17.01■□□□□ 0.31
PCDHGA12O60330 DDX43P3-201ENST00000441064 443 ntBASIC17.01■□□□□ 0.31
PCDHGA12O60330 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 AC023141.13-201ENST00000604991 943 ntBASIC17.01■□□□□ 0.31
PCDHGA12O60330 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 AL645608.8-201ENST00000606034 2086 ntBASIC17.01■□□□□ 0.31
PCDHGA12O60330 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms