Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.39■□□□□ 0.21
DUX1O43812 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX1O43812 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
DUX1O43812 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.39■□□□□ 0.21
DUX1O43812 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX1O43812 AC004835.2-201ENST00000603762 682 ntBASIC16.39■□□□□ 0.21
DUX1O43812 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 NOC2LP1-202ENST00000452600 2235 ntBASIC16.39■□□□□ 0.21
DUX1O43812 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.39■□□□□ 0.21
DUX1O43812 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX1O43812 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX1O43812 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
DUX1O43812 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.39■□□□□ 0.21
DUX1O43812 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DUX1O43812 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX1O43812 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.38■□□□□ 0.21
DUX1O43812 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX1O43812 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.38■□□□□ 0.21
DUX1O43812 MIR4515-201ENST00000584082 81 ntBASIC16.38■□□□□ 0.21
DUX1O43812 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.38■□□□□ 0.21
DUX1O43812 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
DUX1O43812 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
DUX1O43812 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX1O43812 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX1O43812 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX1O43812 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DUX1O43812 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DUX1O43812 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.37■□□□□ 0.21
DUX1O43812 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 AC140658.5-201ENST00000438532 169 ntBASIC16.37■□□□□ 0.21
DUX1O43812 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DUX1O43812 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.37■□□□□ 0.21
DUX1O43812 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.37■□□□□ 0.21
DUX1O43812 CYMP-203ENST00000474680 1263 ntBASIC16.37■□□□□ 0.21
DUX1O43812 RFPL4AP1-201ENST00000530883 850 ntBASIC16.37■□□□□ 0.21
DUX1O43812 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.37■□□□□ 0.21
DUX1O43812 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 AL513210.1-201ENST00000629608 234 ntBASIC16.37■□□□□ 0.21
DUX1O43812 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 GNAS-203ENST00000306120 1878 ntBASIC16.37■□□□□ 0.21
DUX1O43812 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX1O43812 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX1O43812 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.36■□□□□ 0.21
DUX1O43812 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.36■□□□□ 0.21
DUX1O43812 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX1O43812 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DUX1O43812 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX1O43812 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX1O43812 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.36■□□□□ 0.21
DUX1O43812 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX1O43812 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX1O43812 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms