Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.25■□□□□ 0.67
ACTN4O43707 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
ACTN4O43707 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
ACTN4O43707 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.25■□□□□ 0.67
ACTN4O43707 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ACTN4O43707 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.25■□□□□ 0.67
ACTN4O43707 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 AC097637.2-201ENST00000624096 1997 ntBASIC19.25■□□□□ 0.67
ACTN4O43707 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ACTN4O43707 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.25■□□□□ 0.67
ACTN4O43707 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.25■□□□□ 0.67
ACTN4O43707 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.25■□□□□ 0.67
ACTN4O43707 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ACTN4O43707 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.25■□□□□ 0.67
ACTN4O43707 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.25■□□□□ 0.67
ACTN4O43707 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.25■□□□□ 0.67
ACTN4O43707 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.25■□□□□ 0.67
ACTN4O43707 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACTN4O43707 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ACTN4O43707 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.25■□□□□ 0.67
ACTN4O43707 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ACTN4O43707 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.24■□□□□ 0.67
ACTN4O43707 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.24■□□□□ 0.67
ACTN4O43707 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ACTN4O43707 ARMC10P1-201ENST00000313754 855 ntBASIC19.24■□□□□ 0.67
ACTN4O43707 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ACTN4O43707 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.24■□□□□ 0.67
ACTN4O43707 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
ACTN4O43707 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.24■□□□□ 0.67
ACTN4O43707 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 AC138894.3-201ENST00000603787 634 ntBASIC19.24■□□□□ 0.67
ACTN4O43707 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
ACTN4O43707 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ACTN4O43707 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ACTN4O43707 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.24■□□□□ 0.67
ACTN4O43707 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ACTN4O43707 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACTN4O43707 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
ACTN4O43707 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.23■□□□□ 0.67
ACTN4O43707 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
ACTN4O43707 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 AL645728.1-201ENST00000366221 2101 ntBASIC19.23■□□□□ 0.67
ACTN4O43707 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.23■□□□□ 0.67
ACTN4O43707 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 LINC00982-205ENST00000420957 435 ntBASIC19.23■□□□□ 0.67
ACTN4O43707 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.23■□□□□ 0.67
ACTN4O43707 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.23■□□□□ 0.67
ACTN4O43707 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.23■□□□□ 0.67
ACTN4O43707 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 AL591684.3-201ENST00000605187 298 ntBASIC19.23■□□□□ 0.67
ACTN4O43707 AC010331.1-201ENST00000611423 582 ntBASIC19.23■□□□□ 0.67
ACTN4O43707 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.23■□□□□ 0.67
ACTN4O43707 AC093458.2-201ENST00000623150 629 ntBASIC19.23■□□□□ 0.67
ACTN4O43707 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms