Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.91□□□□□ -0.34
SNAI2O43623 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.91□□□□□ -0.34
SNAI2O43623 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SNAI2O43623 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.91□□□□□ -0.34
SNAI2O43623 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SNAI2O43623 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SNAI2O43623 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.9□□□□□ -0.34
SNAI2O43623 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SNAI2O43623 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
SNAI2O43623 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SNAI2O43623 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
SNAI2O43623 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.9□□□□□ -0.34
SNAI2O43623 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.9□□□□□ -0.34
SNAI2O43623 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SNAI2O43623 RBM17P1-201ENST00000453646 1190 ntBASIC12.9□□□□□ -0.34
SNAI2O43623 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 FITM1-202ENST00000559294 800 ntBASIC12.9□□□□□ -0.34
SNAI2O43623 AP003071.4-201ENST00000562276 1284 ntBASIC12.9□□□□□ -0.34
SNAI2O43623 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.9□□□□□ -0.34
SNAI2O43623 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.9□□□□□ -0.34
SNAI2O43623 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.9□□□□□ -0.34
SNAI2O43623 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SNAI2O43623 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SNAI2O43623 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SNAI2O43623 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNAI2O43623 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.9□□□□□ -0.34
SNAI2O43623 KRT89P-201ENST00000620027 1478 ntBASIC12.9□□□□□ -0.34
SNAI2O43623 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SNAI2O43623 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
SNAI2O43623 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SNAI2O43623 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
SNAI2O43623 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.9□□□□□ -0.35
SNAI2O43623 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.89□□□□□ -0.35
SNAI2O43623 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SNAI2O43623 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
SNAI2O43623 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.89□□□□□ -0.35
SNAI2O43623 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.89□□□□□ -0.35
SNAI2O43623 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 UBE2SP1-201ENST00000450587 669 ntBASIC12.89□□□□□ -0.35
SNAI2O43623 C2orf69P3-201ENST00000565542 1120 ntBASIC12.89□□□□□ -0.35
SNAI2O43623 NEK4P2-201ENST00000580004 1012 ntBASIC12.89□□□□□ -0.35
SNAI2O43623 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.89□□□□□ -0.35
SNAI2O43623 ITM2C-210ENST00000620962 501 ntBASIC12.89□□□□□ -0.35
SNAI2O43623 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms