Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KPNA4O00629 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KPNA4O00629 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KPNA4O00629 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KPNA4O00629 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KPNA4O00629 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.14■□□□□ 0.17
KPNA4O00629 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.14■□□□□ 0.17
KPNA4O00629 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KPNA4O00629 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KPNA4O00629 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KPNA4O00629 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KPNA4O00629 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KPNA4O00629 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.14■□□□□ 0.17
KPNA4O00629 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KPNA4O00629 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.14■□□□□ 0.17
KPNA4O00629 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.13■□□□□ 0.17
KPNA4O00629 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.13■□□□□ 0.17
KPNA4O00629 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 HBZP1-201ENST00000354915 429 ntBASIC16.13■□□□□ 0.17
KPNA4O00629 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.13■□□□□ 0.17
KPNA4O00629 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.13■□□□□ 0.17
KPNA4O00629 HOMER2P1-201ENST00000455653 964 ntBASIC16.13■□□□□ 0.17
KPNA4O00629 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.13■□□□□ 0.17
KPNA4O00629 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.13■□□□□ 0.17
KPNA4O00629 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.13■□□□□ 0.17
KPNA4O00629 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.13■□□□□ 0.17
KPNA4O00629 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.13■□□□□ 0.17
KPNA4O00629 GPR32P1-201ENST00000601788 811 ntBASIC16.13■□□□□ 0.17
KPNA4O00629 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.13■□□□□ 0.17
KPNA4O00629 AC022188.1-201ENST00000620960 1664 ntBASIC16.13■□□□□ 0.17
KPNA4O00629 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KPNA4O00629 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.13■□□□□ 0.17
KPNA4O00629 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KPNA4O00629 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
KPNA4O00629 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.12■□□□□ 0.17
KPNA4O00629 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
KPNA4O00629 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
KPNA4O00629 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
KPNA4O00629 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.12■□□□□ 0.17
KPNA4O00629 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.12■□□□□ 0.17
KPNA4O00629 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.12■□□□□ 0.17
KPNA4O00629 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.12■□□□□ 0.17
KPNA4O00629 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 LINC01023-201ENST00000606054 436 ntBASIC16.12■□□□□ 0.17
KPNA4O00629 LINC01451-201ENST00000623792 534 ntBASIC16.12■□□□□ 0.17
KPNA4O00629 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KPNA4O00629 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
KPNA4O00629 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KPNA4O00629 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KPNA4O00629 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KPNA4O00629 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KPNA4O00629 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.11■□□□□ 0.17
KPNA4O00629 LINC01311-201ENST00000565162 1445 ntBASIC16.11■□□□□ 0.17
KPNA4O00629 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KPNA4O00629 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KPNA4O00629 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.11■□□□□ 0.17
KPNA4O00629 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms