Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MTCL1P1-201ENST00000446207 792 ntBASIC14.66□□□□□ -0.06
SDCBPO00560 RNF126P1-202ENST00000569893 925 ntBASIC14.66□□□□□ -0.06
SDCBPO00560 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.66□□□□□ -0.06
SDCBPO00560 AL139327.4-201ENST00000612362 153 ntBASIC14.66□□□□□ -0.06
SDCBPO00560 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.66□□□□□ -0.06
SDCBPO00560 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.66□□□□□ -0.06
SDCBPO00560 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SDCBPO00560 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SDCBPO00560 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SDCBPO00560 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.66□□□□□ -0.06
SDCBPO00560 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.66□□□□□ -0.06
SDCBPO00560 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.65□□□□□ -0.06
SDCBPO00560 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.65□□□□□ -0.06
SDCBPO00560 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.65□□□□□ -0.06
SDCBPO00560 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SDCBPO00560 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SDCBPO00560 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.65□□□□□ -0.06
SDCBPO00560 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.65□□□□□ -0.06
SDCBPO00560 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.65□□□□□ -0.06
SDCBPO00560 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 AC093525.9-201ENST00000624961 1746 ntBASIC14.65□□□□□ -0.06
SDCBPO00560 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.65□□□□□ -0.06
SDCBPO00560 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SDCBPO00560 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
SDCBPO00560 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
SDCBPO00560 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.65□□□□□ -0.06
SDCBPO00560 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDCBPO00560 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SDCBPO00560 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.64□□□□□ -0.07
SDCBPO00560 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SDCBPO00560 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SDCBPO00560 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 AL662844.4-201ENST00000606367 2838 ntBASIC14.64□□□□□ -0.07
SDCBPO00560 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SDCBPO00560 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SDCBPO00560 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.64□□□□□ -0.07
SDCBPO00560 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.64□□□□□ -0.07
SDCBPO00560 SPDYE13P-201ENST00000445314 798 ntBASIC14.64□□□□□ -0.07
SDCBPO00560 AC068472.1-201ENST00000474589 881 ntBASIC14.64□□□□□ -0.07
SDCBPO00560 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
SDCBPO00560 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SDCBPO00560 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SDCBPO00560 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDCBPO00560 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SDCBPO00560 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.64□□□□□ -0.07
SDCBPO00560 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms