Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN5O00501 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CLDN5O00501 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.06■□□□□ 0.48
CLDN5O00501 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.06■□□□□ 0.48
CLDN5O00501 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN5O00501 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN5O00501 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN5O00501 FRMD8P1-201ENST00000440433 1524 ntBASIC18.06■□□□□ 0.48
CLDN5O00501 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CLDN5O00501 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CLDN5O00501 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN5O00501 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CLDN5O00501 AC012313.1-201ENST00000593393 3059 ntBASIC18.06■□□□□ 0.48
CLDN5O00501 LINC02012-201ENST00000608206 1725 ntBASIC18.06■□□□□ 0.48
CLDN5O00501 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CLDN5O00501 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN5O00501 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN5O00501 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN5O00501 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN5O00501 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN5O00501 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLDN5O00501 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLDN5O00501 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLDN5O00501 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN5O00501 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN5O00501 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CLDN5O00501 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN5O00501 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN5O00501 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN5O00501 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN5O00501 AL513190.1-201ENST00000621254 727 ntBASIC18.05■□□□□ 0.48
CLDN5O00501 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN5O00501 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLDN5O00501 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN5O00501 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN5O00501 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLDN5O00501 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLDN5O00501 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDN5O00501 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDN5O00501 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN5O00501 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.04■□□□□ 0.48
CLDN5O00501 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLDN5O00501 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.04■□□□□ 0.48
CLDN5O00501 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN5O00501 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN5O00501 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN5O00501 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CLDN5O00501 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN5O00501 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN5O00501 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLDN5O00501 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN5O00501 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN5O00501 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN5O00501 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN5O00501 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN5O00501 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLDN5O00501 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.03■□□□□ 0.48
CLDN5O00501 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms