Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDC7O00311 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 PCDHA14-201ENST00000506751 2298 ntBASIC16.85■□□□□ 0.29
CDC7O00311 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDC7O00311 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
CDC7O00311 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDC7O00311 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC7O00311 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDC7O00311 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.85■□□□□ 0.29
CDC7O00311 BX005266.1-201ENST00000473402 457 ntBASIC16.85■□□□□ 0.29
CDC7O00311 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CDC7O00311 MIR3652-201ENST00000579335 131 ntBASIC16.85■□□□□ 0.29
CDC7O00311 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.85■□□□□ 0.29
CDC7O00311 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDC7O00311 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDC7O00311 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.85■□□□□ 0.29
CDC7O00311 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 UBALD1-205ENST00000590891 2641 ntBASIC16.84■□□□□ 0.29
CDC7O00311 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC7O00311 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC7O00311 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 LINC00982-205ENST00000420957 435 ntBASIC16.84■□□□□ 0.29
CDC7O00311 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC7O00311 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.84■□□□□ 0.29
CDC7O00311 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC7O00311 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC7O00311 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDC7O00311 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC7O00311 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC7O00311 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC7O00311 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC7O00311 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC7O00311 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDC7O00311 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDC7O00311 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC7O00311 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC7O00311 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC7O00311 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC7O00311 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
CDC7O00311 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC7O00311 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC7O00311 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC7O00311 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC7O00311 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CDC7O00311 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
CDC7O00311 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC7O00311 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC7O00311 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC7O00311 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.83■□□□□ 0.28
CDC7O00311 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDC7O00311 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.83■□□□□ 0.28
CDC7O00311 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC7O00311 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDC7O00311 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
CDC7O00311 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms