Protein–RNA interactions for Protein: O00291

HIP1, Huntingtin-interacting protein 1, humanhuman

Predictions only

Length 1,037 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1O00291 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
HIP1O00291 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.66■□□□□ 0.9
HIP1O00291 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIP1O00291 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
HIP1O00291 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.66■□□□□ 0.9
HIP1O00291 AL021920.2-201ENST00000624828 1351 ntBASIC20.66■□□□□ 0.9
HIP1O00291 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HIP1O00291 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIP1O00291 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.66■□□□□ 0.9
HIP1O00291 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIP1O00291 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIP1O00291 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIP1O00291 AC105020.1-201ENST00000435356 2205 ntBASIC20.66■□□□□ 0.9
HIP1O00291 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
HIP1O00291 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.65■□□□□ 0.9
HIP1O00291 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.65■□□□□ 0.9
HIP1O00291 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HIP1O00291 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.65■□□□□ 0.9
HIP1O00291 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
HIP1O00291 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.65■□□□□ 0.9
HIP1O00291 AF186996.4-201ENST00000467186 377 ntBASIC20.65■□□□□ 0.9
HIP1O00291 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 AP002490.2-201ENST00000524791 560 ntBASIC20.65■□□□□ 0.9
HIP1O00291 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.65■□□□□ 0.9
HIP1O00291 DUX4L17-201ENST00000557360 1267 ntBASIC20.65■□□□□ 0.9
HIP1O00291 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.65■□□□□ 0.9
HIP1O00291 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.65■□□□□ 0.9
HIP1O00291 TP73-AS1-207ENST00000624167 988 ntBASIC20.65■□□□□ 0.9
HIP1O00291 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 AF228730.7-201ENST00000641842 219 ntBASIC20.65■□□□□ 0.9
HIP1O00291 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HIP1O00291 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIP1O00291 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.64■□□□□ 0.9
HIP1O00291 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
HIP1O00291 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
HIP1O00291 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HIP1O00291 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.64■□□□□ 0.9
HIP1O00291 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.64■□□□□ 0.9
HIP1O00291 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.64■□□□□ 0.89
HIP1O00291 KRT18P67-201ENST00000432816 1264 ntBASIC20.64■□□□□ 0.89
HIP1O00291 RPS2P1-201ENST00000434010 821 ntBASIC20.64■□□□□ 0.89
HIP1O00291 AC018712.1-201ENST00000455767 687 ntBASIC20.64■□□□□ 0.89
HIP1O00291 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.64■□□□□ 0.89
HIP1O00291 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.64■□□□□ 0.89
HIP1O00291 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.64■□□□□ 0.89
HIP1O00291 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.64■□□□□ 0.89
HIP1O00291 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.64■□□□□ 0.89
HIP1O00291 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.64■□□□□ 0.89
HIP1O00291 AL805961.1-202ENST00000641562 540 ntBASIC20.64■□□□□ 0.89
HIP1O00291 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.64■□□□□ 0.89
HIP1O00291 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HIP1O00291 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HIP1O00291 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.64■□□□□ 0.89
HIP1O00291 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.64■□□□□ 0.89
HIP1O00291 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.64■□□□□ 0.89
HIP1O00291 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIP1O00291 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIP1O00291 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms