Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 BX276092.7-203ENST00000637198 1536 ntBASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV4S1A1TA0A5B7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.83□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.83□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC148477.8-201ENST00000624298 468 ntBASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AL356309.3-201ENST00000624132 1934 ntBASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 IL9RP2-201ENST00000423948 1312 ntBASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC097374.2-201ENST00000618617 1306 ntBASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV4S1A1TA0A5B7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms