Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 TSPY15P-201ENST00000457163 923 ntBASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 LINC01568-207ENST00000641790 1380 ntBASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 SPDYE15P-201ENST00000424157 909 ntBASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 AL031432.5-201ENST00000641059 760 ntBASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 KRT18P22-201ENST00000402024 1347 ntBASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 AL662844.4-201ENST00000606367 2838 ntBASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D4Q9Y2X8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms