Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 PDPK2P-202ENST00000562415 1191 ntBASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 AC027796.2-201ENST00000575326 344 ntBASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 AL355385.1-201ENST00000606123 409 ntBASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 AC100803.2-201ENST00000562459 1963 ntBASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 KRT18P28-201ENST00000453838 1332 ntBASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX2IPQ9Y2D8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 AC135776.1-201ENST00000319817 2481 ntBASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 ACTG1P14-201ENST00000446382 1122 ntBASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 ELL2P1-201ENST00000413990 1906 ntBASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 ABALON-201ENST00000629058 1903 ntBASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SSX2IPQ9Y2D8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 RHOQP3-201ENST00000437982 621 ntBASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 ALG1L5P-201ENST00000482043 771 ntBASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 AL513190.1-201ENST00000621254 727 ntBASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 AC004877.2-201ENST00000623941 599 ntBASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX2IPQ9Y2D8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms