Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 IGHV3-65-201ENST00000523210 341 ntBASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHA4Q9UN74 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 AC098831.1-202ENST00000438821 336 ntBASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHA4Q9UN74 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 AC020916.1-201ENST00000587762 1774 ntBASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHA4Q9UN74 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 IGHV3-22-201ENST00000520721 359 ntBASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHA4Q9UN74 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 AC087163.2-201ENST00000457299 853 ntBASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 AC079776.4-201ENST00000511039 504 ntBASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 GGTLC5P-201ENST00000617623 998 ntBASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms