Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 AC134043.2-201ENST00000624206 2238 ntBASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 HTR5BP-201ENST00000430851 1154 ntBASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 MKNK2P1-201ENST00000437526 628 ntBASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 AC074386.1-202ENST00000463561 864 ntBASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 AL138688.1-201ENST00000624851 1594 ntBASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB8Q9UN66 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 AC211486.1-202ENST00000416371 468 ntBASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 AC007919.2-201ENST00000444110 511 ntBASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 AC092183.1-201ENST00000469884 875 ntBASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 AC211476.1-201ENST00000503899 468 ntBASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 AP001160.2-201ENST00000596071 487 ntBASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 AL078644.1-201ENST00000609881 752 ntBASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 AC079781.4-201ENST00000641908 219 ntBASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB8Q9UN66 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 RPS6P14-201ENST00000425165 719 ntBASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 RPS8P6-201ENST00000426177 609 ntBASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 AL513480.1-201ENST00000451731 511 ntBASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 AC107918.2-201ENST00000530817 355 ntBASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB8Q9UN66 MIR4469-201ENST00000583919 79 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms