Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIX4Q9UIU6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.29■□□□□ 0.52
SIX4Q9UIU6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 RNA5SP416-201ENST00000516838 111 ntBASIC18.29■□□□□ 0.52
SIX4Q9UIU6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX4Q9UIU6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 AC129492.6-201ENST00000611383 1305 ntBASIC18.28■□□□□ 0.52
SIX4Q9UIU6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 RHOQP3-201ENST00000437982 621 ntBASIC18.28■□□□□ 0.52
SIX4Q9UIU6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 CXCL1P1-201ENST00000502804 216 ntBASIC18.28■□□□□ 0.52
SIX4Q9UIU6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 AC096734.2-201ENST00000562054 433 ntBASIC18.28■□□□□ 0.52
SIX4Q9UIU6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX4Q9UIU6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 PMS2P7-201ENST00000506558 1336 ntBASIC18.27■□□□□ 0.52
SIX4Q9UIU6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms