Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 RN7SL837P-201ENST00000463010 287 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 RAB43P1-201ENST00000561790 589 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 SPDYE18-201ENST00000510091 1050 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 BANF1P1-201ENST00000553684 263 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 AC099568.2-201ENST00000609194 695 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 DFFBP1-201ENST00000433250 979 ntBASIC17.96■□□□□ 0.47
CHD7Q9P2D1 RN7SL752P-201ENST00000463779 287 ntBASIC17.96■□□□□ 0.47
CHD7Q9P2D1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 HLA-V-204ENST00000476601 1289 ntBASIC17.96■□□□□ 0.47
CHD7Q9P2D1 CHCHD2P3-201ENST00000603038 451 ntBASIC17.96■□□□□ 0.47
CHD7Q9P2D1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.96■□□□□ 0.47
CHD7Q9P2D1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHD7Q9P2D1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.96■□□□□ 0.46
CHD7Q9P2D1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.96■□□□□ 0.46
CHD7Q9P2D1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHD7Q9P2D1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 SLC25A6P5-201ENST00000435663 894 ntBASIC17.95■□□□□ 0.46
CHD7Q9P2D1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CHD7Q9P2D1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 ANKRD19P-201ENST00000338192 862 ntBASIC17.94■□□□□ 0.46
CHD7Q9P2D1 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 HCG4-201ENST00000418983 998 ntBASIC17.94■□□□□ 0.46
CHD7Q9P2D1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 MIR4538-201ENST00000581377 78 ntBASIC17.94■□□□□ 0.46
CHD7Q9P2D1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms