Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB16Q9NRJ7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 AC063926.3-201ENST00000624734 5658 ntBASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 MYCLP1-201ENST00000372451 1075 ntBASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB16Q9NRJ7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 C8orf49-201ENST00000525043 1968 ntBASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB16Q9NRJ7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 LINC01311-201ENST00000565162 1445 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 AL353692.3-201ENST00000407031 1396 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 AC097374.2-201ENST00000618617 1306 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 TERF1P1-201ENST00000311003 1181 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 IGHGP-201ENST00000390555 1178 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 MTCL1P1-201ENST00000446207 792 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 AC002558.1-201ENST00000488906 803 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 GPR32P1-201ENST00000601788 811 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 AC079602.3-201ENST00000623931 403 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB16Q9NRJ7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms