Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 AL139384.1-201ENST00000612143 3047 ntBASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 AL353135.1-201ENST00000606729 504 ntBASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.25■□□□□ 0.19
PRDM9Q9NQV7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 KRT18P27-201ENST00000427733 1299 ntBASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 AC012640.2-201ENST00000561606 901 ntBASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 MIR1199-201ENST00000621445 119 ntBASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 AC116407.3-201ENST00000623905 1129 ntBASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRDM9Q9NQV7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms