Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SEC1P-202ENST00000473944 940 ntBASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AC026471.5-201ENST00000615068 467 ntBASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AL049637.2-201ENST00000641778 930 ntBASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 LYSMD4-203ENST00000378904 2122 ntBASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 AC007663.1-201ENST00000438948 1240 ntBASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 AC024243.1-201ENST00000609234 778 ntBASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 AC132872.4-202ENST00000622924 2756 ntBASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SND1-IT1Q9HBX3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 AC022188.1-201ENST00000620960 1664 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms