Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 AC148477.5-201ENST00000625164 1645 ntBASIC15.06■□□□□ 0
CDH20Q9HBT6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CDH20Q9HBT6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CDH20Q9HBT6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.06■□□□□ 0
CDH20Q9HBT6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CDH20Q9HBT6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.06■□□□□ 0
CDH20Q9HBT6 AC079781.3-201ENST00000449110 356 ntBASIC15.06■□□□□ 0
CDH20Q9HBT6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 AF186996.4-201ENST00000467186 377 ntBASIC15.06■□□□□ 0
CDH20Q9HBT6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.06■□□□□ 0
CDH20Q9HBT6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.06■□□□□ 0
CDH20Q9HBT6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.06■□□□□ 0
CDH20Q9HBT6 MTDHP4-201ENST00000600287 670 ntBASIC15.06■□□□□ 0
CDH20Q9HBT6 AC064862.7-201ENST00000604520 867 ntBASIC15.06■□□□□ 0
CDH20Q9HBT6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.06■□□□□ 0
CDH20Q9HBT6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
CDH20Q9HBT6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.06■□□□□ 0
CDH20Q9HBT6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.06■□□□□ 0
CDH20Q9HBT6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.06■□□□□ 0
CDH20Q9HBT6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.06■□□□□ 0
CDH20Q9HBT6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH20Q9HBT6 AL139384.1-201ENST00000612143 3047 ntBASIC15.06■□□□□ 0
CDH20Q9HBT6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.06■□□□□ 0
CDH20Q9HBT6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CDH20Q9HBT6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CDH20Q9HBT6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.05■□□□□ 0
CDH20Q9HBT6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CDH20Q9HBT6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.05■□□□□ -0
CDH20Q9HBT6 FAM197Y8-203ENST00000450145 560 ntBASIC15.05■□□□□ -0
CDH20Q9HBT6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.05■□□□□ -0
CDH20Q9HBT6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.05■□□□□ -0
CDH20Q9HBT6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.05■□□□□ -0
CDH20Q9HBT6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.05■□□□□ -0
CDH20Q9HBT6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.05■□□□□ -0
CDH20Q9HBT6 AL031008.1-201ENST00000619963 541 ntBASIC15.05■□□□□ -0
CDH20Q9HBT6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH20Q9HBT6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.05■□□□□ -0
CDH20Q9HBT6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH20Q9HBT6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH20Q9HBT6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDH20Q9HBT6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CDH20Q9HBT6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 AC097637.2-201ENST00000624096 1997 ntBASIC15.05■□□□□ -0
CDH20Q9HBT6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
CDH20Q9HBT6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH20Q9HBT6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH20Q9HBT6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 AC004817.3-201ENST00000602957 2129 ntBASIC15.04■□□□□ -0
CDH20Q9HBT6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.04■□□□□ -0
CDH20Q9HBT6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CDH20Q9HBT6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 AL135999.2-201ENST00000622438 1686 ntBASIC15.04■□□□□ -0
CDH20Q9HBT6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms