Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 FRMD8P1-201ENST00000440433 1524 ntBASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 AC113404.2-201ENST00000507884 177 ntBASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 AP002414.2-201ENST00000591780 3365 ntBASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 FSCN1P1-201ENST00000568912 1481 ntBASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 SLC29A4P1-201ENST00000398760 971 ntBASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 MFAP1P1-201ENST00000442257 1255 ntBASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 AC023157.3-201ENST00000619086 2088 ntBASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLIRPQ9GZT3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 SNX18-202ENST00000343017 3140 ntBASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 AC026185.1-201ENST00000445748 174 ntBASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.1■□□□□ 0.01
SLIRPQ9GZT3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms