Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 COX11P1-201ENST00000489116 835 ntBASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 NTF6B-201ENST00000591913 560 ntBASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 KRT8P7-201ENST00000533003 1432 ntBASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.36□□□□□ -0.27
NDUFAF3Q9BU61 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 AC034236.2-201ENST00000606662 1610 ntBASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 MIR564-202ENST00000385049 94 ntBASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 AP000523.1-201ENST00000398242 1049 ntBASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 MCCD1P1-208ENST00000445732 328 ntBASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 AL023803.3-201ENST00000615559 522 ntBASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 AC006011.2-201ENST00000621313 1158 ntBASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.35□□□□□ -0.27
NDUFAF3Q9BU61 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms