Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 AC233263.1-201ENST00000578059 224 ntBASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 MIR3180-4-201ENST00000582223 153 ntBASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 AP000692.2-201ENST00000608391 879 ntBASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22CQ9BRL7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 TSPY6P-201ENST00000448518 926 ntBASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 AC008403.3-201ENST00000598924 454 ntBASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 BX276092.7-203ENST00000637198 1536 ntBASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22CQ9BRL7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SEC22CQ9BRL7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms