Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.65■□□□□ 0.74
ARID3AQ99856 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 AL359075.1-203ENST00000462729 1002 ntBASIC19.65■□□□□ 0.74
ARID3AQ99856 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.65■□□□□ 0.74
ARID3AQ99856 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.65■□□□□ 0.74
ARID3AQ99856 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.65■□□□□ 0.74
ARID3AQ99856 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ARID3AQ99856 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ARID3AQ99856 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ARID3AQ99856 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC19.65■□□□□ 0.74
ARID3AQ99856 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ARID3AQ99856 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.65■□□□□ 0.74
ARID3AQ99856 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARID3AQ99856 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.65■□□□□ 0.74
ARID3AQ99856 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ARID3AQ99856 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ARID3AQ99856 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC19.64■□□□□ 0.74
ARID3AQ99856 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ARID3AQ99856 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.64■□□□□ 0.74
ARID3AQ99856 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.64■□□□□ 0.74
ARID3AQ99856 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.64■□□□□ 0.73
ARID3AQ99856 DUX4L26-201ENST00000489078 1255 ntBASIC19.64■□□□□ 0.73
ARID3AQ99856 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.64■□□□□ 0.73
ARID3AQ99856 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.64■□□□□ 0.73
ARID3AQ99856 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 GMCL1P1-201ENST00000463439 1581 ntBASIC19.64■□□□□ 0.73
ARID3AQ99856 PHGDH-209ENST00000641074 1780 ntBASIC19.64■□□□□ 0.73
ARID3AQ99856 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
ARID3AQ99856 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARID3AQ99856 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.64■□□□□ 0.73
ARID3AQ99856 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ARID3AQ99856 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ARID3AQ99856 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ARID3AQ99856 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.63■□□□□ 0.73
ARID3AQ99856 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.63■□□□□ 0.73
ARID3AQ99856 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.63■□□□□ 0.73
ARID3AQ99856 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.63■□□□□ 0.73
ARID3AQ99856 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.63■□□□□ 0.73
ARID3AQ99856 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.63■□□□□ 0.73
ARID3AQ99856 AC092597.1-201ENST00000487352 616 ntBASIC19.63■□□□□ 0.73
ARID3AQ99856 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
ARID3AQ99856 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ARID3AQ99856 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ARID3AQ99856 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.63■□□□□ 0.73
ARID3AQ99856 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARID3AQ99856 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.62■□□□□ 0.73
ARID3AQ99856 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ARID3AQ99856 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.62■□□□□ 0.73
ARID3AQ99856 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ARID3AQ99856 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.62■□□□□ 0.73
ARID3AQ99856 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ARID3AQ99856 STARP1-201ENST00000397973 869 ntBASIC19.62■□□□□ 0.73
ARID3AQ99856 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
ARID3AQ99856 AC063952.2-201ENST00000498792 1227 ntBASIC19.62■□□□□ 0.73
ARID3AQ99856 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.62■□□□□ 0.73
ARID3AQ99856 AC034232.1-201ENST00000506026 1064 ntBASIC19.62■□□□□ 0.73
ARID3AQ99856 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms