Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.33■□□□□ 0.2
BBS4Q96RK4 ABCD1P5-201ENST00000445663 754 ntBASIC16.33■□□□□ 0.2
BBS4Q96RK4 SIGLEC30P-201ENST00000455569 941 ntBASIC16.33■□□□□ 0.2
BBS4Q96RK4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 FOSL1P1-201ENST00000511041 816 ntBASIC16.33■□□□□ 0.2
BBS4Q96RK4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.33■□□□□ 0.2
BBS4Q96RK4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.33■□□□□ 0.2
BBS4Q96RK4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.33■□□□□ 0.2
BBS4Q96RK4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 AL121761.2-201ENST00000598007 1648 ntBASIC16.33■□□□□ 0.2
BBS4Q96RK4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 LINC02012-201ENST00000608206 1725 ntBASIC16.33■□□□□ 0.2
BBS4Q96RK4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.33■□□□□ 0.2
BBS4Q96RK4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BBS4Q96RK4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 AL020989.1-201ENST00000422979 469 ntBASIC16.32■□□□□ 0.2
BBS4Q96RK4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
BBS4Q96RK4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS4Q96RK4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 AL356309.3-201ENST00000624132 1934 ntBASIC16.31■□□□□ 0.2
BBS4Q96RK4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 PCDHA12-202ENST00000613593 2588 ntBASIC16.31■□□□□ 0.2
BBS4Q96RK4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.31■□□□□ 0.2
BBS4Q96RK4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 AP000867.4-201ENST00000641616 219 ntBASIC16.31■□□□□ 0.2
BBS4Q96RK4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BBS4Q96RK4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms