Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 SCARNA2-201ENST00000458748 420 ntBASIC20.33■□□□□ 0.85
NEK1Q96PY6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 AL589182.2-201ENST00000619332 1049 ntBASIC20.33■□□□□ 0.85
NEK1Q96PY6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.33■□□□□ 0.84
NEK1Q96PY6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.33■□□□□ 0.84
NEK1Q96PY6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.33■□□□□ 0.84
NEK1Q96PY6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NEK1Q96PY6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 AC021087.4-201ENST00000563761 564 ntBASIC20.32■□□□□ 0.84
NEK1Q96PY6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.32■□□□□ 0.84
NEK1Q96PY6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEK1Q96PY6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NEK1Q96PY6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 AL139424.1-201ENST00000607572 797 ntBASIC20.31■□□□□ 0.84
NEK1Q96PY6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.31■□□□□ 0.84
NEK1Q96PY6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEK1Q96PY6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.3■□□□□ 0.84
NEK1Q96PY6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
NEK1Q96PY6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.3■□□□□ 0.84
NEK1Q96PY6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NEK1Q96PY6 AC139887.3-201ENST00000568585 713 ntBASIC20.3■□□□□ 0.84
NEK1Q96PY6 AC025062.2-201ENST00000605477 670 ntBASIC20.3■□□□□ 0.84
NEK1Q96PY6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.3■□□□□ 0.84
NEK1Q96PY6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
NEK1Q96PY6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms