Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 HLA-A-201ENST00000376802 1334 ntBASIC14.28□□□□□ -0.12
GAFA1Q96PS6 AP002414.1-201ENST00000391405 1147 ntBASIC14.28□□□□□ -0.12
GAFA1Q96PS6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 RPS15P9-201ENST00000494093 319 ntBASIC14.28□□□□□ -0.12
GAFA1Q96PS6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GAFA1Q96PS6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GAFA1Q96PS6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 FDX1P1-201ENST00000449115 551 ntBASIC14.27□□□□□ -0.13
GAFA1Q96PS6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 AC092910.1-201ENST00000482027 1129 ntBASIC14.27□□□□□ -0.13
GAFA1Q96PS6 AC093909.1-201ENST00000504731 1122 ntBASIC14.27□□□□□ -0.13
GAFA1Q96PS6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 TERC-201ENST00000602385 541 ntBASIC14.27□□□□□ -0.13
GAFA1Q96PS6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.27□□□□□ -0.13
GAFA1Q96PS6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 AC026396.1-201ENST00000419388 421 ntBASIC14.26□□□□□ -0.13
GAFA1Q96PS6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms