Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.93■□□□□ 0.78
CCDC17Q96LX7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 ADH5P3-201ENST00000433842 1137 ntBASIC19.92■□□□□ 0.78
CCDC17Q96LX7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 FAM86C2P-203ENST00000528684 1004 ntBASIC19.92■□□□□ 0.78
CCDC17Q96LX7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CCDC17Q96LX7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 AC004835.2-201ENST00000603762 682 ntBASIC19.91■□□□□ 0.78
CCDC17Q96LX7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 AC099522.2-201ENST00000607001 744 ntBASIC19.91■□□□□ 0.78
CCDC17Q96LX7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 AC068880.1-201ENST00000507289 2297 ntBASIC19.91■□□□□ 0.78
CCDC17Q96LX7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC17Q96LX7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 AL671277.1-201ENST00000429656 993 ntBASIC19.9■□□□□ 0.78
CCDC17Q96LX7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 AL021920.2-201ENST00000624828 1351 ntBASIC19.9■□□□□ 0.78
CCDC17Q96LX7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC17Q96LX7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms