Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AL591684.3-201ENST00000605187 298 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 AC079776.2-201ENST00000641154 1609 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 TUBB8P12-201ENST00000308911 1335 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 TUBB7P-202ENST00000428444 1305 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 TUBB8P7-204ENST00000567960 1332 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 AC084018.2-201ENST00000613093 2607 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM11Q96F44 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM11Q96F44 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 AGGF1P2-201ENST00000426656 2106 ntBASIC18.17■□□□□ 0.5
TRIM11Q96F44 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM11Q96F44 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRIM11Q96F44 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM11Q96F44 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM11Q96F44 AL445228.2-201ENST00000605589 952 ntBASIC18.17■□□□□ 0.5
TRIM11Q96F44 AC010331.1-201ENST00000611423 582 ntBASIC18.17■□□□□ 0.5
TRIM11Q96F44 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
TRIM11Q96F44 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM11Q96F44 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM11Q96F44 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 AC097637.2-201ENST00000624096 1997 ntBASIC18.16■□□□□ 0.5
TRIM11Q96F44 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM11Q96F44 CROCCP1-201ENST00000426910 5675 ntBASIC18.16■□□□□ 0.5
TRIM11Q96F44 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM11Q96F44 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms